Whole genome sequencing of Z. mays ssp. mays inbred line CAU478 - SRA

SRX131108: Whole genome sequencing of Z. mays ssp. mays inbred line CAU478
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 10M spots, 1.2G bases, 773.6Mb downloads

Design: Corvaris sheared total genomic DNA was prepared per Illumina paired-end library protocol, ultimately capturing fragments in the 250nt range and delivered for 76-100bp paired-end sequencing on the Genome Analyzer IIx platform.

Submitted by: Cold Spring Harbor Laboratory

Study: Capturing Extant Variation from a Genome in Flux: Maize HapMap II

• SRP011907 • All experiments • All runs

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A comprehensive characterization of genetic variation across 103 inbred lines representing a wide breadth of the Zea mays lineage: 60 improved maize lines including the parents of the maize nested association mapping (NAM) population, 23 maize landraces, and 19 wild relatives.

Sample: Whole genome sequencing of Z. mays ssp. mays inbred line CAU478

SAMN00839351 • SRS302413 • All experiments • All runs

Organism: Zea mays

Library:

Name: CAU478_library

Instrument: Illumina Genome Analyzer IIx

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward76 reverse

Runs: 1 run, 10M spots, 1.2G bases, 773.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR447771	10,000,000	1.2G	773.6Mb	2012-05-22

ID:: 149240

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Sequence Read Archive

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